Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LAML rs73745655 chr5:25960280 G/A 0.000145 111 15.17 16.17 0 KM Plot
LAML rs73924949 chr2:37171638 C/A 0.000132 111 14.22 15.7 0 KM Plot
LAML rs73927850 chr19:33905530 G/A 7.13E-5 108 15.23 12.17 3 KM Plot
LAML rs73927852 chr19:33906636 C/A 5.18E-5 110 16.17 12.17 3 KM Plot
LAML rs73927873 chr19:33911915 G/A 3.24E-5 110 16.17 12.17 3 KM Plot
LAML rs73927877 chr19:33917799 C/T 1.9E-5 111 16.77 10.67 3 KM Plot
LAML rs73927879 chr19:33918314 C/T 1.9E-5 111 16.77 10.67 3 KM Plot
LAML rs73927882 chr19:33919090 T/C 1.9E-5 111 16.77 10.67 3 KM Plot
LAML rs73927884 chr19:33919445 C/T 1.9E-5 111 16.77 10.67 3 KM Plot
LAML rs73933390 chr2:62577913 G/C 9.28E-5 107 15.7 10.63 0 KM Plot
LAML rs73933392 chr2:62589677 C/T 0.000179 106 15.7 12.17 0 KM Plot
LAML rs740314 chr2:242418618 T/C 8.12E-5 109 1.53 14.63 17.23 KM Plot
LAML rs74203691 chr16:71749267 G/C 0.000153 111 15.23 13.1 0 KM Plot
LAML rs7426276 chr2:1064700 A/G 6.49E-9 111 0 16.3 14.13 KM Plot
LAML rs74299025 chr7:135655159 A/G 7.36E-5 111 13.15 28.93 0 KM Plot